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Edexcel International A Level Chemistry

Revision Notes

Home / International A Level / Chemistry / Edexcel / Revision Notes / 5. Transition Metals & Organic Nitrogen Chemistry / 5.5 Organic Chemistry: Nitrogen Compounds / 5.5.7 Characteristic Behaviour of Amino Acids


5.5.7 Characteristic Behaviour of Amino Acids


Characteristic Behaviour of Amino Acids

Acid / base properties of amino acids

  • Amino acids will undergo most reactions of amines and carboxylic acids including acid-base reactions of:
    • Amines with acids
    • Carboxylic acids with bases
  • However, they can also interact intramolecularly (within themselves) to form a zwitterion
  • A zwitterion is an ion with both a positive (-NH3+) and a negative (-COO-) charge
  • Because of these charges in a zwitterion, there are strong intermolecular forces of attraction between amino acids
    • Amino acids are therefore soluble crystalline solids

Nitrogen Compounds - Zwitterion, downloadable AS & A Level Chemistry revision notes

An amino acid molecule can interact within itself to form a zwitterion

Isoelectric point

  • A solution of amino acids in water will exist as zwitterions with both acidic and basic properties
  • They act as buffer solutions as they resist any changes in pH when small amounts of acids or alkali are added
  • If an acid is added (and thus the pH is lowered):
    • The -COO- part of the zwitterion will accept an H+ ion to reform the -COOH group
    • This causes the zwitterion to become a positively charged ion
  • If a base is added (and thus the pH is raised):
    • The -NH3+ part of the zwitterion will donate an H+ ion to reform the -NH2 group
    • This causes the zwitterion to become a negatively charged ion

Nitrogen Compounds - Buffer Solution of Amino Acids, downloadable AS & A Level Chemistry revision notes

A solution of amino acids can act as a buffer solution by resisting any small changes in pH

  • The pH can be slightly adjusted to reach a point at which neither the negatively charged or positively charged ions dominate and the amino acid exists as a neutral zwitterion
    • This is called the isoelectric point of the amino acid

Nitrogen Compounds - Isoelectric Point of Amino Acids, downloadable AS & A Level Chemistry revision notes

The isoelectric point of amino acids is the pH at which the amino acid exists as a neutral zwitterion

Reactions of the amine group

  • The amine group is basic and reacts with acids to make salts
  • For example, a general amino acid reacts with hydrochloric acid to form the ammonium salt:

H2NCHRCOOH + HCl ⇌ H3N+CHRCOOH + Cl- 

Reactions of the carboxylic acid group

Reaction with aqueous alkalis

  • An amino acid reacts with aqueous alkali such as sodium or potassium hydroxide to form a salt and water
  • For example, a general amino acid reacts with sodium hydroxide to form a sodium salt:

H2NCHRCOOH + NaOH ⇌ H2NCHRCOO- Na+ + H2O

Esterification with alcohols

  • Amino acids, like carboxylic acids, can be esterified by heating with alcohol in the presence of concentrated sulfuric acid 
  • The carboxylic acid group is esterified whilst the basic amine group is protonated due to the acidic conditions:

H2NCHRCOOH + C2H5OH + H+ ⇌ H3N+CHRCOOC2H5  + H2O

Optical activity

  • Almost all 2-amino acids contain a chiral centre (the C of the CH group), and so are optically active
    • The only exception is glycine, which has a CH2 group instead
  • Aqueous solutions of the enantiomers rotate the plane of polarisation of plane-polarised light
    • Dextrorotatory (+)
    • Laevorotatory (-)
  • If an amino acid is synthesised in the lab, a racemic mixture is formed

Peptide bonds

  • Each amino acid contains an amine (-NH2) and carboxylic acid (-COOH) group
  • The new amide bond between two amino acids is also called a peptide link or peptide bond
    • The -NH2 group of one amino acid can react with the -COOH group of another amino acid in a condensation reaction to form a dipeptide
  • Since this is a condensation reaction, a small molecule (in this case H2O) is eliminated
  • The dipeptide still contains an -NH2 and -COOH group at each end of the molecule which can again participate in a condensation reaction to form a tripeptide

Nitrogen Compounds - Formation of Peptide Bonds, downloadable AS & A Level Chemistry revision notes

A peptide bond is an amide bond between two amino acids

  • A polypeptide is formed when many amino acids join together to form a long chain of molecules


  • 1. Structure, Bonding & Introduction to Organic Chemistry
    • 1.1 Formulae & Equations
      • 1.1.1 Formulae & Mass
        • 1.1.2 Avogadro & the Mole
          • 1.1.3 Full & Ionic Equations
            • 1.1.4 Calculating Formulae
            • 1.2 Amount of Substance
              • 1.2.1 Concentration Calculations
                • 1.2.2 Reacting Mass Calculations
                  • 1.2.3 Reacting Volume Calculations
                    • 1.2.4 Calculations of Product
                    • 1.3 Atomic Structure
                      • 1.3.1 Sub-Atomic Particles
                        • 1.3.2 Isotopes & Mass Spectra
                        • 1.4 Electrons & Ions
                          • 1.4.1 Endothermic Ionisation Energy
                            • 1.4.2 Electronic Structures
                              • 1.4.3 Shapes of Orbitals
                                • 1.4.4 Electronic Configurations & Chemical Properties
                                • 1.5 The Periodic Table
                                  • 1.5.1 Periodicity - Ionisation Energy
                                    • 1.5.2 Periodicity - Thermal Trends
                                    • 1.6 Ionic & Metallic Bonding & Structure
                                      • 1.6.1 Evidence of Ions
                                        • 1.6.2 Ionic Bonding & Structures
                                          • 1.6.3 Ionic Bond Strength
                                            • 1.6.4 Polarisation
                                              • 1.6.5 Metallic Bonding & Lattices
                                              • 1.7 Covalent Bonding & Structure
                                                • 1.7.1 Evidence of Covalent Bonding
                                                  • 1.7.2 Covalent Bonding
                                                    • 1.7.3 Carbon Allotropes
                                                      • 1.7.4 Electronegativity
                                                        • 1.7.5 VSEPR Theory
                                                          • 1.7.6 Predicting Shapes & Angles
                                                          • 1.8 Introductory Organic Chemistry
                                                            • 1.8.1 Hazards & Risks
                                                              • 1.8.2 Functional Groups & Homologous Series
                                                                • 1.8.3 Nomenclature & Classification
                                                                  • 1.8.4 Isomers - Structural
                                                                  • 1.9 Alkanes
                                                                    • 1.9.1 Alkanes - Introduction
                                                                      • 1.9.2 Alkanes as Fuels
                                                                        • 1.9.3 Combustion of Alkanes
                                                                          • 1.9.4 Alternative Fuels
                                                                            • 1.9.5 Free Radicals & Fission
                                                                              • 1.9.6 The Free Radical Substitution Mechanism
                                                                              • 1.10 Alkenes
                                                                                • 1.10.1 Alkenes - Introduction
                                                                                  • 1.10.2 Isomers - Geometric
                                                                                    • 1.10.3 Reactions of Alkenes
                                                                                      • 1.10.4 Saturation Test
                                                                                        • 1.10.5 Electrophilic Addition - Mechanism
                                                                                          • 1.10.6 Addition Polymerisation
                                                                                            • 1.10.7 Polymer Disposal
                                                                                          • 2: Energetics, Group Chemistry, Halogenoalkanes & Alcohols
                                                                                            • 2.1 Energetics
                                                                                              • 2.1.1 Enthalpy Level Diagrams
                                                                                                • 2.1.2 Enthalpy Change - Definitions
                                                                                                  • 2.1.3 Using Calorimetry
                                                                                                    • 2.1.4 Using Hess Cycles
                                                                                                      • 2.1.5 Bond Enthalpies
                                                                                                      • 2.2 Intermolecular Forces
                                                                                                        • 2.2.1 Intermolecular Forces - Introduction
                                                                                                          • 2.2.2 Hydrogen Bonding
                                                                                                            • 2.2.3 Physical Properties
                                                                                                              • 2.2.4 Solvent Choice
                                                                                                              • 2.3 Redox Chemistry & Acid-Base Titrations
                                                                                                                • 2.3.1 Oxidation Numbers - Introduction
                                                                                                                  • 2.3.2 Oxidation & Reduction
                                                                                                                    • 2.3.3 Disproportionation Reactions
                                                                                                                      • 2.3.4 Ionic Equations
                                                                                                                        • 2.3.5 Acid-Base Titrations with Indicators
                                                                                                                        • 2.4 Groups 1 & 2
                                                                                                                          • 2.4.1 Ionisation Energy - Groups 1 & 2
                                                                                                                            • 2.4.2 Reactivity - Groups 1 & 2
                                                                                                                              • 2.4.3 Oxides & Hydroxides
                                                                                                                                • 2.4.4 Group 2 Hydroxides & Sulfates
                                                                                                                                  • 2.4.5 Nitrates & Carbonates
                                                                                                                                    • 2.4.6 Flame Tests
                                                                                                                                      • 2.4.7 Qualitative Tests
                                                                                                                                      • 2.5 Group 7
                                                                                                                                        • 2.5.1 Trends of the Group 7 Elements
                                                                                                                                          • 2.5.2 Halogen Displacement Reactions
                                                                                                                                            • 2.5.3 Redox Reactions of the Halogens
                                                                                                                                              • 2.5.4 Other Reactions of the Halogens
                                                                                                                                              • 2.6 Introduction to Kinetics & Equilibria
                                                                                                                                                • 2.6.1 Collision Theory
                                                                                                                                                  • 2.6.2 Rates of Reaction
                                                                                                                                                    • 2.6.3 Maxwell-Boltzmann Distributions
                                                                                                                                                      • 2.6.4 Catalysts & Energy
                                                                                                                                                        • 2.6.5 Dynamic Equilibrium in Reversible Reactions
                                                                                                                                                          • 2.6.6 Le Chatelier's Principle
                                                                                                                                                            • 2.6.7 Industrial Compromises
                                                                                                                                                            • 2.7 Organic Chemistry - Introduction
                                                                                                                                                              • 2.7.1 Types of Reaction
                                                                                                                                                                • 2.7.2 Reaction Mechanisms - Introduction
                                                                                                                                                                • 2.8 Organic Chemistry: Halogenoalkanes
                                                                                                                                                                  • 2.8.1 Halogenoalkanes - Introduction
                                                                                                                                                                    • 2.8.2 Reactions of Halogenoalkanes
                                                                                                                                                                      • 2.8.3 The Nucleophilic Substitution Mechanism
                                                                                                                                                                        • 2.8.4 Hydrolysis of Halogenoalkanes
                                                                                                                                                                          • 2.8.5 Trends in Halogenoalkanes
                                                                                                                                                                          • 2.9 Organic Chemistry: Alcohols
                                                                                                                                                                            • 2.9.1 Alcohols - Introduction
                                                                                                                                                                              • 2.9.2 Reactions of Alcohols
                                                                                                                                                                                • 2.9.3 Oxidation of Alcohols
                                                                                                                                                                                • 2.10 Organic Chemistry: Techniques & Spectra
                                                                                                                                                                                  • 2.10.1 Organic Chemistry Techniques
                                                                                                                                                                                    • 2.10.2 Interpreting Mass Spectra
                                                                                                                                                                                      • 2.10.3 Using Infrared Spectrometry
                                                                                                                                                                                    • 3. Practical Skills in Chemistry I
                                                                                                                                                                                      • 3.1 Physical Chemistry Core Practicals
                                                                                                                                                                                        • 3.1.1 Molar Volume of a Gas
                                                                                                                                                                                          • 3.1.2 Determining Enthalpy Change of Reaction
                                                                                                                                                                                            • 3.1.3 Determining Concentrations
                                                                                                                                                                                              • 3.1.4 Standard Solutions
                                                                                                                                                                                              • 3.2 Inorganic & Organic Chemistry Core Practicals
                                                                                                                                                                                                • 3.2.1 Hydrolysis of Halogenoalkanes
                                                                                                                                                                                                  • 3.2.2 Chlorination of 2-Methylpropan-2-ol
                                                                                                                                                                                                    • 3.2.3 Propan-1-ol Oxidation
                                                                                                                                                                                                      • 3.2.4 AS Qualitative Analysis
                                                                                                                                                                                                    • 4: Rates, Equilibria & Further Organic Chemistry
                                                                                                                                                                                                      • 4.1 Kinetics
                                                                                                                                                                                                        • 4.1.1 Kinetic Rates
                                                                                                                                                                                                          • 4.1.2 Rate Equations & Orders
                                                                                                                                                                                                            • 4.1.3 Reaction Orders - Graphs
                                                                                                                                                                                                              • 4.1.4 Obtaining Rate Data
                                                                                                                                                                                                                • 4.1.5 Initial-Rate Method
                                                                                                                                                                                                                  • 4.1.6 Continuous Monitoring Method
                                                                                                                                                                                                                    • 4.1.7 Rate-Determining Steps from Equations
                                                                                                                                                                                                                      • 4.1.8 Reaction Mechanisms
                                                                                                                                                                                                                        • 4.1.9 Acid-Catalysed Iodination of Propanone
                                                                                                                                                                                                                          • 4.1.10 Activation Energy & Arrhenius
                                                                                                                                                                                                                          • 4.2 Entropy
                                                                                                                                                                                                                            • 4.2.1 Entropy - Introduction
                                                                                                                                                                                                                              • 4.2.2 Entropy Changes
                                                                                                                                                                                                                                • 4.2.3 Total Entropy
                                                                                                                                                                                                                                  • 4.2.4 Reaction Feasibility
                                                                                                                                                                                                                                  • 4.3 Energetics
                                                                                                                                                                                                                                    • 4.3.1 Born-Haber Cycles - Key Terms
                                                                                                                                                                                                                                      • 4.3.2 Born-Haber Cycles
                                                                                                                                                                                                                                        • 4.3.3 Polarisation
                                                                                                                                                                                                                                          • 4.3.4 Enthalpy of Solution - Key Terms
                                                                                                                                                                                                                                            • 4.3.5 Enthalpy of Solution - Calculations
                                                                                                                                                                                                                                              • 4.3.6 Enthalpy of Solution - Ionic Charge & Radius
                                                                                                                                                                                                                                              • 4.4 Chemical Equilibria
                                                                                                                                                                                                                                                • 4.4.1 Equilibrium Constant, Kc
                                                                                                                                                                                                                                                  • 4.4.2 Equilibrium Constant, Kp
                                                                                                                                                                                                                                                    • 4.4.3 Equilibrium Constant & Conditions
                                                                                                                                                                                                                                                      • 4.4.4 Equilibrium Constant & Temperature
                                                                                                                                                                                                                                                        • 4.4.5 Equilibrium Constant & Entropy
                                                                                                                                                                                                                                                        • 4.5 Acid-base Equilibria
                                                                                                                                                                                                                                                          • 4.5.1 Brønsted–Lowry Acid & Base Theory
                                                                                                                                                                                                                                                            • 4.5.2 pH
                                                                                                                                                                                                                                                              • 4.5.3 Acid Strength
                                                                                                                                                                                                                                                                • 4.5.4 pH Calculations of Acids
                                                                                                                                                                                                                                                                  • 4.5.5. Ionic Product of Water
                                                                                                                                                                                                                                                                    • 4.5.6 Analysing pH Data
                                                                                                                                                                                                                                                                      • 4.5.7 Titration Curves
                                                                                                                                                                                                                                                                        • 4.5.8 Buffers
                                                                                                                                                                                                                                                                          • 4.5.9 Buffer Calculations
                                                                                                                                                                                                                                                                          • 4.6 Organic Chemistry: Chirality
                                                                                                                                                                                                                                                                            • 4.6.1 Chirality in Optical Isomers
                                                                                                                                                                                                                                                                              • 4.6.2 Racemates & Optical Activity
                                                                                                                                                                                                                                                                                • 4.6.3 Mechanisms & Optical Activity
                                                                                                                                                                                                                                                                                • 4.7 Organic Chemistry: Carbonyls
                                                                                                                                                                                                                                                                                  • 4.7.1 Carbonyls
                                                                                                                                                                                                                                                                                    • 4.7.2 Reactions of Carbonyls
                                                                                                                                                                                                                                                                                    • 4.8 Organic Chemistry: Carboxylic Acids
                                                                                                                                                                                                                                                                                      • 4.8.1 Carboxylic Acids
                                                                                                                                                                                                                                                                                        • 4.8.2 Preparation of Carboxylic Acids
                                                                                                                                                                                                                                                                                          • 4.8.3 Reactions of Carboxylic Acids
                                                                                                                                                                                                                                                                                            • 4.8.4 Acyl Chlorides & Esters
                                                                                                                                                                                                                                                                                              • 4.8.5 Acid & Alkaline Hydrolysis of Esters
                                                                                                                                                                                                                                                                                                • 4.8.6 Forming Polyesters
                                                                                                                                                                                                                                                                                                • 4.9 Organic Analytical Techniques
                                                                                                                                                                                                                                                                                                  • 4.9.1 High Resolution Mass Spectrometry
                                                                                                                                                                                                                                                                                                    • 4.9.2 Carbon-13 NMR Spectroscopy
                                                                                                                                                                                                                                                                                                      • 4.9.3 Low Resolution Proton NMR
                                                                                                                                                                                                                                                                                                        • 4.9.4 High Resolution Proton NMR
                                                                                                                                                                                                                                                                                                          • 4.9.5 Chromatography - TLC
                                                                                                                                                                                                                                                                                                            • 4.9.6 Chromatography - HPLC & GC
                                                                                                                                                                                                                                                                                                          • 5. Transition Metals & Organic Nitrogen Chemistry
                                                                                                                                                                                                                                                                                                            • 5.1 Redox Equilibria
                                                                                                                                                                                                                                                                                                              • 5.1.1 Reduction & Oxidation
                                                                                                                                                                                                                                                                                                                • 5.1.2 Standard Electrode Potential
                                                                                                                                                                                                                                                                                                                  • 5.1.3 Standard Electrode Potential
                                                                                                                                                                                                                                                                                                                    • 5.1.4 Conventional Cell Representation
                                                                                                                                                                                                                                                                                                                      • 5.1.5 Thermodynamics & Electrode Potential
                                                                                                                                                                                                                                                                                                                        • 5.1.6 Fuel Cells
                                                                                                                                                                                                                                                                                                                          • 5.1.7 Redox Titration Calculations
                                                                                                                                                                                                                                                                                                                          • 5.2 Transition Metals & Complexes
                                                                                                                                                                                                                                                                                                                            • 5.2.1 Transition Metals
                                                                                                                                                                                                                                                                                                                              • 5.2.2 Transition Metal Complexes
                                                                                                                                                                                                                                                                                                                                • 5.2.3 Colour in Aqueous ions
                                                                                                                                                                                                                                                                                                                                  • 5.2.4 Ligands
                                                                                                                                                                                                                                                                                                                                    • 5.2.5 Ligand Exchange
                                                                                                                                                                                                                                                                                                                                      • 5.2.6 Octahedral & Tetrahedral Complexes
                                                                                                                                                                                                                                                                                                                                        • 5.2.7 Square Planar Complexes
                                                                                                                                                                                                                                                                                                                                          • 5.2.8 Haemoglobin & Ligand Exchange
                                                                                                                                                                                                                                                                                                                                          • 5.3 Transition Metal Reactions
                                                                                                                                                                                                                                                                                                                                            • 5.3.1 Vanadium Chemistry
                                                                                                                                                                                                                                                                                                                                              • 5.3.2 Chromium Chemistry
                                                                                                                                                                                                                                                                                                                                                • 5.3.3 Ions in Aqueous Solution
                                                                                                                                                                                                                                                                                                                                                  • 5.3.4 Catalysts
                                                                                                                                                                                                                                                                                                                                                    • 5.3.5 Homogeneous Catalysis
                                                                                                                                                                                                                                                                                                                                                      • 5.3.6 Autocatalysis
                                                                                                                                                                                                                                                                                                                                                      • 5.4 Organic Chemistry: Arenes
                                                                                                                                                                                                                                                                                                                                                        • 5.4.1 Benzene - Structure & Stability
                                                                                                                                                                                                                                                                                                                                                          • 5.4.2 Benzene Reactions
                                                                                                                                                                                                                                                                                                                                                            • 5.4.3 Benzene - Electrophilic Substitution
                                                                                                                                                                                                                                                                                                                                                              • 5.4.4 Phenol Bromination
                                                                                                                                                                                                                                                                                                                                                              • 5.5 Organic Chemistry: Nitrogen Compounds
                                                                                                                                                                                                                                                                                                                                                                • 5.5.1 Amines, Amides & Amino Acids - Introduction
                                                                                                                                                                                                                                                                                                                                                                  • 5.5.2 Primary Aliphatic Amines
                                                                                                                                                                                                                                                                                                                                                                    • 5.5.3 Aromatic Amines
                                                                                                                                                                                                                                                                                                                                                                      • 5.5.4 Amides
                                                                                                                                                                                                                                                                                                                                                                        • 5.5.5 Polymerisation
                                                                                                                                                                                                                                                                                                                                                                          • 5.5.6 Polyamides & Poly(ethenol)
                                                                                                                                                                                                                                                                                                                                                                            • 5.5.7 Characteristic Behaviour of Amino Acids
                                                                                                                                                                                                                                                                                                                                                                            • 5.6 Organic Synthesis
                                                                                                                                                                                                                                                                                                                                                                              • 5.6.1 Deducing Organic Structures
                                                                                                                                                                                                                                                                                                                                                                                • 5.6.2 Planning Reaction Schemes
                                                                                                                                                                                                                                                                                                                                                                                  • 5.6.3 Increasing the Carbon Chain Length
                                                                                                                                                                                                                                                                                                                                                                                    • 5.6.4 Organic Techniques - Preparation
                                                                                                                                                                                                                                                                                                                                                                                      • 5.6.5 Organic Techniques - Purification
                                                                                                                                                                                                                                                                                                                                                                                        • 5.6.6 Organic Techniques - Purity
                                                                                                                                                                                                                                                                                                                                                                                      • 6. Practical Skills in Chemistry II
                                                                                                                                                                                                                                                                                                                                                                                        • 6.1 Advanced Physical Chemistry Core Practicals
                                                                                                                                                                                                                                                                                                                                                                                          • 6.1.1 Rates of Reaction - Titrimetric Method
                                                                                                                                                                                                                                                                                                                                                                                            • 6.1.2 Rates of Reaction - Clock Reaction
                                                                                                                                                                                                                                                                                                                                                                                              • 6.1.3 Activation Energy
                                                                                                                                                                                                                                                                                                                                                                                                • 6.1.4 Finding Ka Values
                                                                                                                                                                                                                                                                                                                                                                                                  • 6.1.5 Electrochemical Cells
                                                                                                                                                                                                                                                                                                                                                                                                  • 6.2 Advanced Inorganic & Organic Chemistry Core Practicals
                                                                                                                                                                                                                                                                                                                                                                                                    • 6.2.1 Redox Titration - Iron(II) & Manganate(VII)
                                                                                                                                                                                                                                                                                                                                                                                                      • 6.2.2 Redox Titration -Thiosulfate & Iodine
                                                                                                                                                                                                                                                                                                                                                                                                        • 6.2.3 Transition Metal Complexes
                                                                                                                                                                                                                                                                                                                                                                                                          • 6.2.4 A-Level Qualitative Analysis
                                                                                                                                                                                                                                                                                                                                                                                                            • 6.2.5 Aspirin Preparation


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